import json, gzip import pytest from fatcat_tools.importers import JstorImporter, Bs4XmlFilePusher from fixtures import api from bs4 import BeautifulSoup @pytest.fixture(scope="function") def jstor_importer(api): with open('tests/files/ISSN-to-ISSN-L.snip.txt', 'r') as issn_file: yield JstorImporter(api, issn_file, extid_map_file='tests/files/example_map.sqlite3', bezerk_mode=True) @pytest.fixture(scope="function") def jstor_importer_existing(api): with open('tests/files/ISSN-to-ISSN-L.snip.txt', 'r') as issn_file: yield JstorImporter(api, issn_file, extid_map_file='tests/files/example_map.sqlite3', bezerk_mode=False) def test_jstor_importer(jstor_importer): last_index = jstor_importer.api.get_changelog(limit=1)[0].index with open('tests/files/jstor-article-10.2307_111039.xml', 'r') as f: jstor_importer.bezerk_mode = True counts = Bs4XmlFilePusher(jstor_importer, f, "article").run() assert counts['insert'] == 1 assert counts['exists'] == 0 assert counts['skip'] == 0 # fetch most recent editgroup change = jstor_importer.api.get_changelog_entry(index=last_index+1) eg = change.editgroup assert eg.description assert "jstor" in eg.description.lower() assert eg.extra['git_rev'] assert "fatcat_tools.JstorImporter" in eg.extra['agent'] last_index = jstor_importer.api.get_changelog(limit=1)[0].index with open('tests/files/jstor-article-10.2307_111039.xml', 'r') as f: jstor_importer.bezerk_mode = False jstor_importer.reset() counts = Bs4XmlFilePusher(jstor_importer, f, "article").run() assert counts['insert'] == 0 assert counts['exists'] == 1 assert counts['skip'] == 0 assert last_index == jstor_importer.api.get_changelog(limit=1)[0].index def test_jstor_xml_parse(jstor_importer): with open('tests/files/jstor-article-10.2307_111039.xml', 'r') as f: soup = BeautifulSoup(f, "xml") r = jstor_importer.parse_record(soup.find_all("article")[0]) print(r.extra) assert r.title == "On the Universal Law of Attraction, Including that of Gravitation, as a Particular Case of Approximation Deducible from the Principle that Equal and Similar Particles of Matter Move Similarly, Relatively to Each other. [Abstract]" assert r.subtitle == None assert r.original_title == None assert r.publisher == "The Royal Society" assert r.release_type == "abstract" assert r.release_stage == "published" assert r.license_slug == None assert r.ext_ids.doi == None assert r.ext_ids.jstor == "111039" assert r.language == "en" assert r.volume == "5" assert r.issue == None assert r.pages == "831-832" # None because jan 1st assert r.release_date == None assert r.release_year == 1843 # matched by ISSN, so shouldn't be in there? #assert extra['container_name'] == "Abstracts of the Papers Communicated to the Royal Society of London" assert len(r.contribs) == 1 assert r.extra['jstor']['journal_ids'] == ['abstpapecommroya', 'j100687'] assert r.contribs[0].raw_name == "John Kinnersley Smythies" assert r.contribs[0].given_name == "John Kinnersley" assert r.contribs[0].surname == "Smythies" assert r.refs == None